Testudinibacter sp. TR-2022

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Testudinibacter

Description

Testudinibacter sp. TR-2022 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which indicates a relatively simple genomic structure. The strain is cataloged under the accession number VDHD00000000.1. The classification of Testudinibacter sp. TR-2022 as Gram-negative suggests that it possesses an outer membrane containing lipopolysaccharides, a feature typical of this group of bacteria. This structural characteristic can influence its interactions with the environment, including its resistance to certain antibiotics and its ability to form biofilms. The single replicon observed in Testudinibacter sp. TR-2022 may reflect its adaptability and evolutionary strategies, potentially allowing for efficient replication and maintenance of genetic material. Such genetic simplicity can be advantageous in specific ecological niches where rapid growth or adaptation is necessary. In summary, Testudinibacter sp. TR-2022 exemplifies a Gram-negative, rod-shaped bacterium with a unique genomic architecture, as indicated by its single replicon. The understanding of its structural and genetic features can provide insights into its ecological roles and interactions within microbial communities. Further research may elucidate its specific functions and contributions to its habitat, enhancing our knowledge of microbial diversity and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusTestudinibacter
SpeciesTestudinibacter sp. TR-2022
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Testudinibacter sp. TR-2022 strain Cuba42

Gene Summary

Adenine Count

727362 bp

Thymine Count

727856 bp

Guanine Count

604554 bp

Cytosine Count

595852 bp

Genome Length

2655624 bp

Protein-coding Genes

2390 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-dependent alcohol dehydrogenaseFHQ26_00010Not AvailablePositive1017 - 207838362.1
terc family proteinFHQ26_00015Not AvailablePositive2402 - 337636569.3
peroxiredoxin cFHQ26_00020Not AvailableNegative3450 - 405222343.6
cystathionine beta-lyaseFHQ26_00025Not AvailablePositive4331 - 553944615.4
tigr01620 family proteinFHQ26_00030Not AvailableNegative5609 - 670941258.1
Ncrna_class:otherNot AvailableNot AvailablePositive6951 - 7133Not Available
ycjx family proteinFHQ26_00035Not AvailableNegative6725 - 813154102.7
envelope stress response membrane protein pspcFHQ26_00040Not AvailableNegative8171 - 854514036.0
envelope stress response membrane protein pspbFHQ26_00045Not AvailableNegative8564 - 88009373.62
abc transporter substrate-binding proteinFHQ26_00050Not AvailablePositive8931 - 1064965371.9

Displaying genes 71 – 80 of 2506 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

135 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 135 metabolites

Health Effects

No health effects information available for this bacterium.