Sphingorhabdus sp. SMR4y

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus sp. SMR4y is characterized by possessing a single replicon, indicating a streamlined genomic structure. The organism is cataloged under the accession number NZ_CP022336.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. The genus Sphingorhabdus is known for its role in various ecological niches, particularly in environments where organic matter decomposition occurs. While specific traits of Sphingorhabdus sp. SMR4y are not detailed in the provided information, the single replicon suggests it may have adaptations that enhance its survival and functionality in its habitat. The presence of this organism in microbial communities could have implications for nutrient cycling and soil health, as members of the Sphingorhabdus genus are often involved in the breakdown of complex organic compounds. This underscores the importance of understanding such microorganisms, as they may play critical roles in maintaining ecosystem dynamics and facilitating the degradation of organic matter. Further studies on Sphingorhabdus sp. SMR4y could lead to insights into its ecological functions and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. SMR4y
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. SMR4y chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3314 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
his-xaa-ser repeat protein hxsaSPHFLASMR4Y_RS01860Not AvailablePositive406225 - 40680020511.4
tigr03982 family his-xaa-ser system proteinSPHFLASMR4Y_RS01865Not AvailablePositive406775 - 40717315304.7
his-xaa-ser system-associated maug-like proteinSPHFLASMR4Y_RS01870Not AvailablePositive407157 - 40841346002.6
hypothetical proteinSPHFLASMR4Y_RS01880Not AvailablePositive409189 - 4094048245.87
conjugal transfer protein trag n-terminal domain-containing proteinSPHFLASMR4Y_RS01885Not AvailableNegative409406 - 41211196693.3
conjugal transfer protein trahSPHFLASMR4Y_RS01890Not AvailableNegative412127 - 41355750383.3
conjugal transfer protein trafSPHFLASMR4Y_RS01895Not AvailableNegative413547 - 41442232659.2
conjugal transfer protein tranSPHFLASMR4Y_RS01900Not AvailableNegative414419 - 41615263304.8
type-f conjugative transfer system pilin assembly protein trbcSPHFLASMR4Y_RS17295Not AvailableNegative416156 - 41659915382.6
hypothetical proteinSPHFLASMR4Y_RS17300Not AvailablePositive416606 - 41695912890.8

Displaying genes 391 – 400 of 3384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.