Sphingorhabdus sp. SMR4y

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus sp. SMR4y is characterized by possessing a single replicon, indicating a streamlined genomic structure. The organism is cataloged under the accession number NZ_CP022336.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. The genus Sphingorhabdus is known for its role in various ecological niches, particularly in environments where organic matter decomposition occurs. While specific traits of Sphingorhabdus sp. SMR4y are not detailed in the provided information, the single replicon suggests it may have adaptations that enhance its survival and functionality in its habitat. The presence of this organism in microbial communities could have implications for nutrient cycling and soil health, as members of the Sphingorhabdus genus are often involved in the breakdown of complex organic compounds. This underscores the importance of understanding such microorganisms, as they may play critical roles in maintaining ecosystem dynamics and facilitating the degradation of organic matter. Further studies on Sphingorhabdus sp. SMR4y could lead to insights into its ecological functions and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. SMR4y
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. SMR4y chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3314 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr03084 family metal-binding proteinSPHFLASMR4Y_RS12035Not AvailableNegative2503596 - 250441130315.4
acyclic terpene utilization atua family proteinSPHFLASMR4Y_RS12040Not AvailableNegative2504426 - 250623463124.8
voc family proteinSPHFLASMR4Y_RS12045Not AvailableNegative2506239 - 250661913614.3
sdr family oxidoreductaseSPHFLASMR4Y_RS12050Not AvailablePositive2506745 - 250751827020.5
sdr family oxidoreductaseSPHFLASMR4Y_RS12055Not AvailablePositive2507613 - 250854534571.3
hupe/urej family proteinSPHFLASMR4Y_RS12060Not AvailableNegative2508649 - 250963835404.8
peptidyl-prolyl cis-trans isomeraseSPHFLASMR4Y_RS12065Not AvailableNegative2509635 - 251045030798.1
duf3604 domain-containing proteinSPHFLASMR4Y_RS12070Not AvailableNegative2510541 - 251243069226.9
phytoene desaturase family proteinSPHFLASMR4Y_RS12075Not AvailableNegative2512519 - 251412657595.6
duf885 domain-containing proteinSPHFLASMR4Y_RS12080Not AvailablePositive2514283 - 251610067761.7

Displaying genes 2451 – 2460 of 3384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.