Sphingorhabdus sp. SMR4y

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus sp. SMR4y is characterized by possessing a single replicon, indicating a streamlined genomic structure. The organism is cataloged under the accession number NZ_CP022336.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. The genus Sphingorhabdus is known for its role in various ecological niches, particularly in environments where organic matter decomposition occurs. While specific traits of Sphingorhabdus sp. SMR4y are not detailed in the provided information, the single replicon suggests it may have adaptations that enhance its survival and functionality in its habitat. The presence of this organism in microbial communities could have implications for nutrient cycling and soil health, as members of the Sphingorhabdus genus are often involved in the breakdown of complex organic compounds. This underscores the importance of understanding such microorganisms, as they may play critical roles in maintaining ecosystem dynamics and facilitating the degradation of organic matter. Further studies on Sphingorhabdus sp. SMR4y could lead to insights into its ecological functions and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. SMR4y
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. SMR4y chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3314 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spore coat u domain-containing proteinSPHFLASMR4Y_RS07645Not AvailablePositive1619863 - 162036316807.8
molecular chaperoneSPHFLASMR4Y_RS07650Not AvailablePositive1620561 - 162114220992.0
fimbria/pilus outer membrane usher proteinSPHFLASMR4Y_RS07655Not AvailablePositive1621114 - 162360989049.7
hypothetical proteinSPHFLASMR4Y_RS17065Not AvailablePositive1623835 - 16239935616.86
hypothetical proteinSPHFLASMR4Y_RS07665Not AvailablePositive1624179 - 162510833346.3
Trna-glyNot AvailableNot AvailablePositive1625317 - 1625391Not Available
tetratricopeptide repeat proteinSPHFLASMR4Y_RS07675Not AvailablePositive1625614 - 162652232130.3
lon peptidase substrate-binding domain-containing proteinSPHFLASMR4Y_RS07680Not AvailablePositive1626519 - 162713923056.5
trm112 family proteinSPHFLASMR4Y_RS07685Not AvailablePositive1627223 - 16273484508.46
hypothetical proteinSPHFLASMR4Y_RS16875Not AvailableNegative1627450 - 16276507237.68

Displaying genes 1561 – 1570 of 3384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.