Rhizobium indicum

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indicum is a rod-shaped bacterium notable for its ability to fix nitrogen in symbiotic relationships with leguminous plants. This trait is crucial for enhancing soil fertility and supporting plant growth. R. indicum possesses flagella, which facilitate its movement, allowing it to navigate through the soil environment to establish symbiosis with host plants effectively. The genome of R. indicum is characterized by the presence of three replicons, which may contribute to its genetic diversity and adaptability in various environmental conditions. This genomic structure is significant for understanding the bacterium's metabolism and its role in the nitrogen cycle. Accessions related to R. indicum include NZ_CP054034.1, NZ_CP054023.1, and NZ_CP054036.1, which provide valuable resources for genetic and genomic studies. These accessions can be utilized for further exploration into the genetic mechanisms underlying its symbiotic capabilities and ecological interactions. The ecological insight derived from R. indicum's traits points to its importance in sustainable agriculture. By forming beneficial associations with leguminous crops, R. indicum aids in reducing the need for chemical fertilizers, promoting an environmentally friendly approach to farming. Its ability to adapt and thrive in various soil conditions highlights its potential role in enhancing soil health and supporting agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indicum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indicum
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indicum strain JKLM 13E plasmid pPR13E05, complete

Gene Summary

Adenine Count

52503 bp

Thymine Count

53079 bp

Guanine Count

83894 bp

Cytosine Count

84094 bp

Genome Length

273570 bp

Protein-coding Genes

255 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseFFM53_RS30800Not AvailableNegative232110 - 23284425213.4
iclr family transcriptional regulatorFFM53_RS30805Not AvailablePositive233261 - 23404628866.5
amidohydrolase family proteinFFM53_RS30810Not AvailablePositive234119 - 23495530803.6
helix-turn-helix domain-containing proteinFFM53_RS30815Not AvailablePositive235158 - 23556214814.7
hypothetical proteinFFM53_RS30820Not AvailableNegative235644 - 23591010032.0
tfua-like proteinFFM53_RS30825Not AvailableNegative235977 - 23672027366.9
ycao-like family proteinFFM53_RS30830Not AvailableNegative236717 - 23797945190.1
hypothetical proteinFFM53_RS30835Not AvailableNegative237993 - 2381365067.99
btad domain-containing putative transcriptional regulatorFFM53_RS30840Not AvailableNegative238242 - 24018872935.0
sugar phosphate isomerase/epimerase family proteinFFM53_RS30845Not AvailableNegative240456 - 24121428195.4

Displaying genes 471 – 480 of 945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.