Rhizobium indicum

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indicum is a rod-shaped bacterium notable for its ability to fix nitrogen in symbiotic relationships with leguminous plants. This trait is crucial for enhancing soil fertility and supporting plant growth. R. indicum possesses flagella, which facilitate its movement, allowing it to navigate through the soil environment to establish symbiosis with host plants effectively. The genome of R. indicum is characterized by the presence of three replicons, which may contribute to its genetic diversity and adaptability in various environmental conditions. This genomic structure is significant for understanding the bacterium's metabolism and its role in the nitrogen cycle. Accessions related to R. indicum include NZ_CP054034.1, NZ_CP054023.1, and NZ_CP054036.1, which provide valuable resources for genetic and genomic studies. These accessions can be utilized for further exploration into the genetic mechanisms underlying its symbiotic capabilities and ecological interactions. The ecological insight derived from R. indicum's traits points to its importance in sustainable agriculture. By forming beneficial associations with leguminous crops, R. indicum aids in reducing the need for chemical fertilizers, promoting an environmentally friendly approach to farming. Its ability to adapt and thrive in various soil conditions highlights its potential role in enhancing soil health and supporting agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indicum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indicum
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indicum strain JKLM 13E plasmid pPR13E05, complete

Gene Summary

Adenine Count

52503 bp

Thymine Count

53079 bp

Guanine Count

83894 bp

Cytosine Count

84094 bp

Genome Length

273570 bp

Protein-coding Genes

255 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter permeaseFFM53_RS30305Not AvailablePositive117836 - 11869332144.4
abc transporter substrate-binding proteinFFM53_RS30310Not AvailablePositive118767 - 11997243504.7
abc transporter atp-binding proteinFFM53_RS30315Not AvailablePositive120163 - 12129640986.0
adenylate/guanylate cyclase domain-containing proteinFFM53_RS30320Not AvailableNegative121879 - 12358563121.2
d-ta family plp-dependent enzymeFFM53_RS30325Not AvailableNegative124085 - 12518539235.0
m81 family metallopeptidaseFFM53_RS30330Not AvailableNegative125186 - 12666153182.0
hypothetical proteinFFM53_RS30335Not AvailableNegative126692 - 12717418579.9
rida family proteinFFM53_RS30340Not AvailablePositive127286 - 12767514347.1
murr/rpir family transcriptional regulatorFFM53_RS30345Not AvailablePositive127698 - 12856131484.9
sdr family oxidoreductaseFFM53_RS30350Not AvailablePositive128587 - 12936326939.0

Displaying genes 371 – 380 of 945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.