Rhizobium indicum

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indicum is a rod-shaped bacterium notable for its ability to fix nitrogen in symbiotic relationships with leguminous plants. This trait is crucial for enhancing soil fertility and supporting plant growth. R. indicum possesses flagella, which facilitate its movement, allowing it to navigate through the soil environment to establish symbiosis with host plants effectively. The genome of R. indicum is characterized by the presence of three replicons, which may contribute to its genetic diversity and adaptability in various environmental conditions. This genomic structure is significant for understanding the bacterium's metabolism and its role in the nitrogen cycle. Accessions related to R. indicum include NZ_CP054034.1, NZ_CP054023.1, and NZ_CP054036.1, which provide valuable resources for genetic and genomic studies. These accessions can be utilized for further exploration into the genetic mechanisms underlying its symbiotic capabilities and ecological interactions. The ecological insight derived from R. indicum's traits points to its importance in sustainable agriculture. By forming beneficial associations with leguminous crops, R. indicum aids in reducing the need for chemical fertilizers, promoting an environmentally friendly approach to farming. Its ability to adapt and thrive in various soil conditions highlights its potential role in enhancing soil health and supporting agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indicum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indicum
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indicum strain JKLM 13E plasmid pPR13E05, complete

Gene Summary

Adenine Count

52503 bp

Thymine Count

53079 bp

Guanine Count

83894 bp

Cytosine Count

84094 bp

Genome Length

273570 bp

Protein-coding Genes

255 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxymuconolactone decarboxylase family proteinFFM53_RS29955Not AvailableNegative49004 - 4946216471.8
sigma-70 family rna polymerase sigma factorFFM53_RS29960Not AvailablePositive49571 - 5044031517.6
amidohydrolase/deacetylase family metallohydrolaseFFM53_RS29965Not AvailablePositive50713 - 5192143380.0
iclr family transcriptional regulatorFFM53_RS29970Not AvailableNegative52046 - 5289430671.4
type ii toxin-antitoxin system vapc family toxinFFM53_RS29975Not AvailableNegative53013 - 5343515161.3
type ii toxin-antitoxin system phd/yefm family antitoxinFFM53_RS29980Not AvailableNegative53435 - 536839121.17
hypothetical proteinFFM53_RS29985Not AvailableNegative53967 - 541827742.49
tetr/acrr family transcriptional regulatorFFM53_RS29990Not AvailablePositive54310 - 5493322276.5
hypothetical proteinFFM53_RS29995Not AvailablePositive55017 - 552057280.47
duf1810 domain-containing proteinFFM53_RS30000Not AvailableNegative55254 - 5569416354.5

Displaying genes 301 – 310 of 945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.