Variovorax sp. KBS0712

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. KBS0712 is a rod-shaped bacterium characterized by a single replicon. This organism is part of the genus Variovorax, which is known for its metabolic versatility and ability to degrade various environmental pollutants. The specific strain KBS0712 has been cataloged with the accession number VCCD00000000.2, indicating its genetic sequence is available for further study. The rod shape of Variovorax sp. KBS0712 suggests adaptations that may facilitate motility and nutrient uptake within diverse habitats. The presence of a single replicon typically indicates a streamlined genetic organization, which may contribute to efficient replication and cellular function. Ecologically, members of the Variovorax genus are often associated with soil and aquatic environments, where they play a crucial role in biogeochemical cycles. Their ability to degrade complex organic compounds makes them important for the remediation of contaminated sites, thereby enhancing soil health and promoting sustainability. The traits of Variovorax sp. KBS0712 highlight its potential utility in environmental biotechnology, particularly in bioremediation efforts. Understanding its genetic and metabolic pathways can provide insights into harnessing its capabilities for cleanup processes in polluted ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. KBS0712
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. KBS0712 12, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156845 bp

Thymine Count

1155363 bp

Guanine Count

2432076 bp

Cytosine Count

2465206 bp

Genome Length

7209490 bp

Protein-coding Genes

6467 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)/fad-dependent oxidoreductaseFFI97_033010Not AvailablePositive7105343 - 710644637901.7
duf883 family proteinFFI97_033015Not AvailablePositive7106580 - 710687610317.4
phage holin family proteinFFI97_033020Not AvailablePositive7106961 - 710766225971.8
quinone-dependent dihydroorotate dehydrogenaseFFI97_033025Not AvailableNegative7107691 - 710877037950.8
ribose-5-phosphate isomerase rpiaFFI97_033030Not AvailablePositive7108811 - 710951524455.6
glutaredoxin family proteinFFI97_033035Not AvailableNegative7109565 - 711022123102.5
m3 family metallopeptidaseFFI97_033040Not AvailableNegative7110254 - 711230275773.6
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldFFI97_033045Not AvailableNegative7112432 - 711328329561.2
response regulator transcription factorFFI97_033050Not AvailableNegative7113364 - 711399923372.3
pas domain s-box proteinFFI97_033055Not AvailableNegative7113996 - 711653694270.3

Displaying genes 6451 – 6460 of 6554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.