Variovorax sp. KBS0712

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. KBS0712 is a rod-shaped bacterium characterized by a single replicon. This organism is part of the genus Variovorax, which is known for its metabolic versatility and ability to degrade various environmental pollutants. The specific strain KBS0712 has been cataloged with the accession number VCCD00000000.2, indicating its genetic sequence is available for further study. The rod shape of Variovorax sp. KBS0712 suggests adaptations that may facilitate motility and nutrient uptake within diverse habitats. The presence of a single replicon typically indicates a streamlined genetic organization, which may contribute to efficient replication and cellular function. Ecologically, members of the Variovorax genus are often associated with soil and aquatic environments, where they play a crucial role in biogeochemical cycles. Their ability to degrade complex organic compounds makes them important for the remediation of contaminated sites, thereby enhancing soil health and promoting sustainability. The traits of Variovorax sp. KBS0712 highlight its potential utility in environmental biotechnology, particularly in bioremediation efforts. Understanding its genetic and metabolic pathways can provide insights into harnessing its capabilities for cleanup processes in polluted ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. KBS0712
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. KBS0712 12, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156845 bp

Thymine Count

1155363 bp

Guanine Count

2432076 bp

Cytosine Count

2465206 bp

Genome Length

7209490 bp

Protein-coding Genes

6467 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFFI97_031480Not AvailablePositive6771040 - 677145315132.4
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaFFI97_031485Not AvailablePositive6771839 - 677286134943.2
alpha-ketoacid dehydrogenase subunit betaFFI97_031490Not AvailablePositive6772852 - 677381433689.7
winged helix-turn-helix transcriptional regulatorFFI97_031495Not AvailablePositive6773836 - 677428516240.6
sdr family oxidoreductaseFFI97_031500Not AvailableNegative6774273 - 677504625967.9
lysr family transcriptional regulatorFFI97_031505Not AvailablePositive6775170 - 677609933411.5
tripartite tricarboxylate transporter substrate binding proteinFFI97_031510Not AvailablePositive6776171 - 677720535584.0
duf1840 domain-containing proteinFFI97_031515Not AvailableNegative6777331 - 677766011841.2
methyltransferase domain-containing proteinFFI97_031520Not AvailableNegative6777678 - 677894947232.5
bifunctional salicylyl-coa 5-hydroxylase/oxidoreductaseFFI97_031525Not AvailablePositive6779069 - 678145387621.8

Displaying genes 6151 – 6160 of 6554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.