Variovorax sp. KBS0712

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. KBS0712 is a rod-shaped bacterium characterized by a single replicon. This organism is part of the genus Variovorax, which is known for its metabolic versatility and ability to degrade various environmental pollutants. The specific strain KBS0712 has been cataloged with the accession number VCCD00000000.2, indicating its genetic sequence is available for further study. The rod shape of Variovorax sp. KBS0712 suggests adaptations that may facilitate motility and nutrient uptake within diverse habitats. The presence of a single replicon typically indicates a streamlined genetic organization, which may contribute to efficient replication and cellular function. Ecologically, members of the Variovorax genus are often associated with soil and aquatic environments, where they play a crucial role in biogeochemical cycles. Their ability to degrade complex organic compounds makes them important for the remediation of contaminated sites, thereby enhancing soil health and promoting sustainability. The traits of Variovorax sp. KBS0712 highlight its potential utility in environmental biotechnology, particularly in bioremediation efforts. Understanding its genetic and metabolic pathways can provide insights into harnessing its capabilities for cleanup processes in polluted ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. KBS0712
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. KBS0712 12, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156845 bp

Thymine Count

1155363 bp

Guanine Count

2432076 bp

Cytosine Count

2465206 bp

Genome Length

7209490 bp

Protein-coding Genes

6467 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
poly-beta-1,6 n-acetyl-d-glucosamine synthaseFFI97_027810Not AvailablePositive5968880 - 597016048838.2
poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgadFFI97_027815Not AvailablePositive5970150 - 597071621096.6
sdr family oxidoreductaseFFI97_027820Not AvailablePositive5970836 - 597163327355.2
hypothetical proteinFFI97_027825Not AvailableNegative5971701 - 597198810523.7
hypothetical proteinFFI97_027830Not AvailableNegative5972015 - 597355356086.1
trap transporter large permease subunitFFI97_027835Not AvailableNegative5973843 - 597515647174.5
trap transporter small permease subunitFFI97_027840Not AvailableNegative5975166 - 597569919497.1
trap transporter substrate-binding proteinFFI97_027845Not AvailableNegative5975706 - 597667434655.5
lysr family transcriptional regulatorFFI97_027850Not AvailableNegative5976934 - 597783933337.1
zinc-binding alcohol dehydrogenase family proteinFFI97_027855Not AvailablePositive5977929 - 597893935461.0

Displaying genes 5441 – 5450 of 6554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.