Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. KBS0712 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1156845 bp
Thymine Count
1155363 bp
Guanine Count
2432076 bp
Cytosine Count
2465206 bp
Genome Length
7209490 bp
Protein-coding Genes
6467 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | FFI97_023850 | Not Available | Positive | 5073634 - 5074665 | 36035.7 |
| type vi secretion system contractile sheath small subunit | FFI97_023855 | Not Available | Positive | 5074715 - 5075227 | 18375.1 |
| type vi secretion system contractile sheath large subunit | FFI97_023860 | Not Available | Positive | 5075281 - 5076774 | 55199.0 |
| type vi secretion system tube protein hcp | FFI97_023865 | Not Available | Positive | 5076927 - 5077406 | 16942.6 |
| peptidoglycan-binding protein | FFI97_023870 | Not Available | Positive | 5077495 - 5077995 | 18540.9 |
| serine/threonine-protein phosphatase | FFI97_023875 | Not Available | Negative | 5078067 - 5078861 | 28332.5 |
| type vi secretion system-associated fha domain protein tagh | FFI97_023880 | Not Available | Negative | 5078905 - 5080578 | 57196.3 |
| duf4150 domain-containing protein | FFI97_023885 | Not Available | Negative | 5080693 - 5081088 | 13407.7 |
| duf3540 domain-containing protein | FFI97_023890 | Not Available | Negative | 5081100 - 5081771 | 23975.0 |
| pentapeptide repeat-containing protein | FFI97_023895 | Not Available | Negative | 5081799 - 5082854 | 37616.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
