Variovorax sp. KBS0712

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. KBS0712 is a rod-shaped bacterium characterized by a single replicon. This organism is part of the genus Variovorax, which is known for its metabolic versatility and ability to degrade various environmental pollutants. The specific strain KBS0712 has been cataloged with the accession number VCCD00000000.2, indicating its genetic sequence is available for further study. The rod shape of Variovorax sp. KBS0712 suggests adaptations that may facilitate motility and nutrient uptake within diverse habitats. The presence of a single replicon typically indicates a streamlined genetic organization, which may contribute to efficient replication and cellular function. Ecologically, members of the Variovorax genus are often associated with soil and aquatic environments, where they play a crucial role in biogeochemical cycles. Their ability to degrade complex organic compounds makes them important for the remediation of contaminated sites, thereby enhancing soil health and promoting sustainability. The traits of Variovorax sp. KBS0712 highlight its potential utility in environmental biotechnology, particularly in bioremediation efforts. Understanding its genetic and metabolic pathways can provide insights into harnessing its capabilities for cleanup processes in polluted ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. KBS0712
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. KBS0712 12, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156845 bp

Thymine Count

1155363 bp

Guanine Count

2432076 bp

Cytosine Count

2465206 bp

Genome Length

7209490 bp

Protein-coding Genes

6467 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system tube protein hcpFFI97_007525Not AvailableNegative1643655 - 164414017717.8
type vi secretion system contractile sheath large subunitFFI97_007530Not AvailableNegative1644268 - 164575855966.9
type vi secretion system contractile sheath small subunitFFI97_007535Not AvailableNegative1645793 - 164633819824.7
type vi secretion system atpase tsshFFI97_007540Not AvailableNegative1646436 - 164914197561.0
nadp-dependent isocitrate dehydrogenaseFFI97_007545Not AvailableNegative1649502 - 165076145924.3
cell envelope biogenesis protein tolaFFI97_007550Not AvailablePositive1650981 - 165131911332.4
hypothetical proteinFFI97_007555Not AvailablePositive1651472 - 16516576227.78
duf192 domain-containing proteinFFI97_007560Not AvailablePositive1651749 - 165221917542.4
superoxide dismutaseFFI97_007565Not AvailableNegative1652289 - 165287021375.2
exodeoxyribonuclease vii large subunitFFI97_007570Not AvailableNegative1652921 - 165423446884.5

Displaying genes 1481 – 1490 of 6554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.