Variovorax sp. KBS0712

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. KBS0712 is a rod-shaped bacterium characterized by a single replicon. This organism is part of the genus Variovorax, which is known for its metabolic versatility and ability to degrade various environmental pollutants. The specific strain KBS0712 has been cataloged with the accession number VCCD00000000.2, indicating its genetic sequence is available for further study. The rod shape of Variovorax sp. KBS0712 suggests adaptations that may facilitate motility and nutrient uptake within diverse habitats. The presence of a single replicon typically indicates a streamlined genetic organization, which may contribute to efficient replication and cellular function. Ecologically, members of the Variovorax genus are often associated with soil and aquatic environments, where they play a crucial role in biogeochemical cycles. Their ability to degrade complex organic compounds makes them important for the remediation of contaminated sites, thereby enhancing soil health and promoting sustainability. The traits of Variovorax sp. KBS0712 highlight its potential utility in environmental biotechnology, particularly in bioremediation efforts. Understanding its genetic and metabolic pathways can provide insights into harnessing its capabilities for cleanup processes in polluted ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. KBS0712
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. KBS0712 12, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156845 bp

Thymine Count

1155363 bp

Guanine Count

2432076 bp

Cytosine Count

2465206 bp

Genome Length

7209490 bp

Protein-coding Genes

6467 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseFFI97_005160Not AvailablePositive1152971 - 115381928891.2
allantoin permeaseFFI97_005165Not AvailableNegative1153764 - 115510446649.4
hamp domain-containing proteinFFI97_005170Not AvailablePositive1155400 - 115733771580.3
oxidoreductaseFFI97_005175Not AvailableNegative1157311 - 115829434332.9
aromatic ring-hydroxylating dioxygenase subunit alphaFFI97_005180Not AvailableNegative1158291 - 115951745078.3
tripartite tricarboxylate transporter substrate binding proteinFFI97_005185Not AvailableNegative1159514 - 116054536518.8
lysr family transcriptional regulatorFFI97_005190Not AvailablePositive1160630 - 116154733745.6
tetr/acrr family transcriptional regulatorFFI97_005195Not AvailableNegative1161531 - 116227126923.5
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeFFI97_005200Not AvailablePositive1162387 - 116368846350.4
nad(p)/fad-dependent oxidoreductaseFFI97_005205Not AvailableNegative1163675 - 116475137634.2

Displaying genes 1021 – 1030 of 6554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.