Streptomyces oryziradicis

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Actinacidiphila

Description

Streptomyces oryziradicis is a Gram-positive bacterium characterized by its rod shape. This organism is part of the Streptomyces genus, which is known for its significant role in natural antibiotic production and soil ecology. S. oryziradicis possesses a single replicon, indicating a streamlined genetic organization that can contribute to its adaptability in various environments. The accessions for S. oryziradicis include SUMC00000000.1, which provides a reference for researchers studying this specific strain. The genetic and phenotypic traits of S. oryziradicis may enhance its ability to thrive in soil environments, where it likely participates in nutrient cycling and interacts with other microbial communities. An ecological insight into S. oryziradicis is its potential role in agricultural systems, particularly in rice cultivation, as suggested by its name. The bacterium may contribute to the health of rice plants through processes such as promoting plant growth or suppressing plant pathogens. This highlights the importance of studying Streptomyces species like S. oryziradicis for their beneficial applications in sustainable agriculture and soil health management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusActinacidiphila
SpeciesActinacidiphila oryziradicis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinacidiphila oryziradicis strain NEAU-C40 Scaffold389, whole

Gene Summary

Adenine Count

1762751 bp

Thymine Count

1756761 bp

Guanine Count

3995399 bp

Cytosine Count

4015694 bp

Genome Length

11530635 bp

Protein-coding Genes

9834 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
voc family proteinFCI23_38310Not AvailablePositive8180661 - 818107114959.7
type ii toxin-antitoxin system vapb family antitoxinFCI23_38320Not AvailablePositive8181693 - 81819087538.89
pin domain nucleaseFCI23_38325Not AvailablePositive8181905 - 818232115076.9
type ii toxin-antitoxin system vapc family toxinFCI23_38335Not AvailableNegative8182635 - 818305715268.3
antitoxinFCI23_38340Not AvailableNegative8183054 - 81832848501.09
deaminaseFCI23_38345Not AvailableNegative8183695 - 818439925943.7
hypothetical proteinFCI23_38350Not AvailableNegative8184339 - 818487519053.7
sigma-70 family rna polymerase sigma factorFCI23_38355Not AvailableNegative8184872 - 818586135667.5
dha2 family efflux mfs transporter permease subunitFCI23_38360Not AvailableNegative8185851 - 818730549418.4
duf4232 domain-containing proteinFCI23_38365Not AvailablePositive8187527 - 818805117598.8

Displaying genes 7031 – 7040 of 9928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.