Streptomyces oryziradicis

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Actinacidiphila

Description

Streptomyces oryziradicis is a Gram-positive bacterium characterized by its rod shape. This organism is part of the Streptomyces genus, which is known for its significant role in natural antibiotic production and soil ecology. S. oryziradicis possesses a single replicon, indicating a streamlined genetic organization that can contribute to its adaptability in various environments. The accessions for S. oryziradicis include SUMC00000000.1, which provides a reference for researchers studying this specific strain. The genetic and phenotypic traits of S. oryziradicis may enhance its ability to thrive in soil environments, where it likely participates in nutrient cycling and interacts with other microbial communities. An ecological insight into S. oryziradicis is its potential role in agricultural systems, particularly in rice cultivation, as suggested by its name. The bacterium may contribute to the health of rice plants through processes such as promoting plant growth or suppressing plant pathogens. This highlights the importance of studying Streptomyces species like S. oryziradicis for their beneficial applications in sustainable agriculture and soil health management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusActinacidiphila
SpeciesActinacidiphila oryziradicis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinacidiphila oryziradicis strain NEAU-C40 Scaffold389, whole

Gene Summary

Adenine Count

1762751 bp

Thymine Count

1756761 bp

Guanine Count

3995399 bp

Cytosine Count

4015694 bp

Genome Length

11530635 bp

Protein-coding Genes

9834 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFCI23_26420Not AvailableNegative5679842 - 56800667674.15
sarcosine oxidase subunit gammaFCI23_26425Not AvailableNegative5680237 - 568085421524.7
sarcosine oxidase subunit delta family proteinFCI23_26430Not AvailableNegative5680847 - 5684095115356.0
sarcosine oxidase subunit beta family proteinFCI23_26435Not AvailableNegative5684187 - 568541944051.4
fad-dependent oxidoreductaseFCI23_26440Not AvailableNegative5685543 - 568798188591.4
glycine/betaine abc transporter substrate-binding proteinFCI23_26445Not AvailableNegative5688190 - 568918535703.2
abc transporter permease subunitFCI23_26450Not AvailableNegative5689242 - 569123069331.6
atp-binding cassette domain-containing proteinFCI23_26455Not AvailableNegative5691230 - 569228838479.7
aldehyde dehydrogenase family proteinFCI23_26460Not AvailableNegative5692403 - 569387252455.0
formyltetrahydrofolate deformylaseFCI23_26465Not AvailablePositive5694115 - 569498732713.3

Displaying genes 4901 – 4910 of 9928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.