Streptomyces oryziradicis

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Actinacidiphila

Description

Streptomyces oryziradicis is a Gram-positive bacterium characterized by its rod shape. This organism is part of the Streptomyces genus, which is known for its significant role in natural antibiotic production and soil ecology. S. oryziradicis possesses a single replicon, indicating a streamlined genetic organization that can contribute to its adaptability in various environments. The accessions for S. oryziradicis include SUMC00000000.1, which provides a reference for researchers studying this specific strain. The genetic and phenotypic traits of S. oryziradicis may enhance its ability to thrive in soil environments, where it likely participates in nutrient cycling and interacts with other microbial communities. An ecological insight into S. oryziradicis is its potential role in agricultural systems, particularly in rice cultivation, as suggested by its name. The bacterium may contribute to the health of rice plants through processes such as promoting plant growth or suppressing plant pathogens. This highlights the importance of studying Streptomyces species like S. oryziradicis for their beneficial applications in sustainable agriculture and soil health management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusActinacidiphila
SpeciesActinacidiphila oryziradicis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinacidiphila oryziradicis strain NEAU-C40 Scaffold389, whole

Gene Summary

Adenine Count

1762751 bp

Thymine Count

1756761 bp

Guanine Count

3995399 bp

Cytosine Count

4015694 bp

Genome Length

11530635 bp

Protein-coding Genes

9834 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yebc/pmpr family dna-binding transcriptional regulatorFCI23_06570Not AvailablePositive1369104 - 136985326401.0
crossover junction endodeoxyribonuclease ruvcFCI23_06575Not AvailablePositive1370047 - 137063120254.6
holliday junction branch migration protein ruvaFCI23_06580Not AvailablePositive1370628 - 137125121342.7
holliday junction branch migration dna helicase ruvbFCI23_06585Not AvailablePositive1371544 - 137259037184.0
preprotein translocase subunit yajcFCI23_06590Not AvailablePositive1372753 - 137322616679.3
protein translocase subunit secdFCI23_06595Not AvailablePositive1373320 - 137509260374.1
protein translocase subunit secfFCI23_06600Not AvailablePositive1375092 - 137621639738.4
adenine phosphoribosyltransferaseFCI23_06605Not AvailablePositive1376294 - 137685719140.3
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseFCI23_06610Not AvailablePositive1376996 - 137947691725.0
duf349 domain-containing proteinFCI23_06615Not AvailableNegative1379581 - 138081046280.1

Displaying genes 1261 – 1270 of 9928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.