Labilibacter sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinilabiliaceae

Genus

Labilibacter

Description

Labilibacter sediminis is a bacterial species characterized by having a single replicon, as indicated by its genomic structure. This trait suggests a relatively simple genetic organization, which may influence the organism's adaptability and function in its environment. The specific accession number for Labilibacter sediminis is VCHY00000000.1, which serves as a reference for its genomic data in sequence databases. Understanding the genomic composition of Labilibacter sediminis can provide insights into its ecological role. As a member of the microbial community, it may engage in interactions that influence nutrient cycling and the dynamics of sediment ecosystems. The presence of a single replicon may facilitate efficient replication and resource use, possibly allowing Labilibacter sediminis to thrive in specific niches within sedimentary environments. Biologically, the traits of Labilibacter sediminis suggest that it could be well-adapted to its habitat. The streamlined genomic organization associated with having one replicon may confer advantages under certain environmental pressures, which could include fluctuations in nutrient availability or competition with other microbial species. Thus, the traits of Labilibacter sediminis not only reflect its genetic composition but also hint at its potential ecological interactions within sediment habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinilabiliaceae
GenusLabilibacter
SpeciesLabilibacter sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibacter sediminis


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4112 genes

Non-Coding Genes

561 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinE9993_00055Not AvailableNegative12260 - 1461789061.2
glycoside hydrolase family 3 proteinE9993_00060Not AvailableNegative15113 - 1699970199.7
glycoside hydrolase family 2 proteinE9993_00065Not AvailableNegative17110 - 1976199546.1
d-hexose-6-phosphate mutarotaseE9993_00070Not AvailablePositive20003 - 2092635386.7
tim barrel proteinE9993_00075Not AvailableNegative21329 - 2240540389.2
divalent metal cation transporterE9993_00080Not AvailableNegative22435 - 2367944617.4
glucose 1-dehydrogenaseE9993_00085Not AvailableNegative23689 - 2444726844.4
glucuronate isomeraseE9993_00090Not AvailableNegative24476 - 2588553882.1
rraa family proteinE9993_00095Not AvailableNegative25897 - 2658925613.8
helix-turn-helix domain-containing proteinE9993_00100Not AvailablePositive26733 - 2758132511.4

Displaying genes 41 – 50 of 4673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.