Labilibacter sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinilabiliaceae

Genus

Labilibacter

Description

Labilibacter sediminis is a bacterial species characterized by having a single replicon, as indicated by its genomic structure. This trait suggests a relatively simple genetic organization, which may influence the organism's adaptability and function in its environment. The specific accession number for Labilibacter sediminis is VCHY00000000.1, which serves as a reference for its genomic data in sequence databases. Understanding the genomic composition of Labilibacter sediminis can provide insights into its ecological role. As a member of the microbial community, it may engage in interactions that influence nutrient cycling and the dynamics of sediment ecosystems. The presence of a single replicon may facilitate efficient replication and resource use, possibly allowing Labilibacter sediminis to thrive in specific niches within sedimentary environments. Biologically, the traits of Labilibacter sediminis suggest that it could be well-adapted to its habitat. The streamlined genomic organization associated with having one replicon may confer advantages under certain environmental pressures, which could include fluctuations in nutrient availability or competition with other microbial species. Thus, the traits of Labilibacter sediminis not only reflect its genetic composition but also hint at its potential ecological interactions within sediment habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinilabiliaceae
GenusLabilibacter
SpeciesLabilibacter sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibacter sediminis strain CG51 CG51_Scaffold382, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

75 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-grasp domain-containing proteinE9993_16815Not AvailablePositive4475081 - 447713277826.0
acyl-coa dehydrogenaseE9993_16820Not AvailablePositive4477442 - 447858742040.3
type 2 isopentenyl-diphosphate delta-isomeraseE9993_16825Not AvailablePositive4478617 - 447960636737.6
hydroxymethylglutaryl-coa reductase, degradativeE9993_16830Not AvailablePositive4479962 - 448126347537.0
hypothetical proteinE9993_16835Not AvailablePositive4481311 - 448225235351.5
diphosphomevalonate decarboxylaseE9993_16840Not AvailablePositive4482330 - 448339139946.6
mevalonate kinaseE9993_16845Not AvailablePositive4483394 - 448435036044.4
t9ss type a sorting domain-containing proteinE9993_16850Not AvailablePositive4484561 - 448615961126.6
valine--trna ligaseE9993_16855Not AvailableNegative4486252 - 448887699573.5
duf4328 domain-containing proteinE9993_16860Not AvailableNegative4489106 - 448974424421.1

Displaying genes 3341 – 3350 of 4673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.