Labilibacter sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinilabiliaceae

Genus

Labilibacter

Description

Labilibacter sediminis is a bacterial species characterized by having a single replicon, as indicated by its genomic structure. This trait suggests a relatively simple genetic organization, which may influence the organism's adaptability and function in its environment. The specific accession number for Labilibacter sediminis is VCHY00000000.1, which serves as a reference for its genomic data in sequence databases. Understanding the genomic composition of Labilibacter sediminis can provide insights into its ecological role. As a member of the microbial community, it may engage in interactions that influence nutrient cycling and the dynamics of sediment ecosystems. The presence of a single replicon may facilitate efficient replication and resource use, possibly allowing Labilibacter sediminis to thrive in specific niches within sedimentary environments. Biologically, the traits of Labilibacter sediminis suggest that it could be well-adapted to its habitat. The streamlined genomic organization associated with having one replicon may confer advantages under certain environmental pressures, which could include fluctuations in nutrient availability or competition with other microbial species. Thus, the traits of Labilibacter sediminis not only reflect its genetic composition but also hint at its potential ecological interactions within sediment habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinilabiliaceae
GenusLabilibacter
SpeciesLabilibacter sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibacter sediminis strain CG51 CG51_Scaffold382, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

75 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinE9993_15290Not AvailableNegative4057839 - 405935657291.2
tonb-dependent receptorE9993_15295Not AvailableNegative4059400 - 4062711122067.0
substrate-binding domain-containing proteinE9993_15300Not AvailableNegative4062890 - 406392739622.0
nucleotidyltransferaseE9993_15305Not AvailablePositive4064179 - 406508734206.7
phosphoglucosamine mutaseE9993_15310Not AvailablePositive4065092 - 406645949054.7
aminoglycoside phosphotransferase family proteinE9993_15315Not AvailablePositive4066520 - 406761742053.3
udp-glucose 4-epimerase galeE9993_15320Not AvailablePositive4067771 - 406879337700.9
hypothetical proteinE9993_15325Not AvailablePositive4069230 - 406973618725.0
hypothetical proteinE9993_15330Not AvailableNegative4069751 - 407027219948.8
hypothetical proteinE9993_15335Not AvailablePositive4070860 - 407235656797.1

Displaying genes 3041 – 3050 of 4673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.