Labilibacter sediminis

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinilabiliaceae

Genus

Labilibacter

Description

Labilibacter sediminis is a bacterial species characterized by having a single replicon, as indicated by its genomic structure. This trait suggests a relatively simple genetic organization, which may influence the organism's adaptability and function in its environment. The specific accession number for Labilibacter sediminis is VCHY00000000.1, which serves as a reference for its genomic data in sequence databases. Understanding the genomic composition of Labilibacter sediminis can provide insights into its ecological role. As a member of the microbial community, it may engage in interactions that influence nutrient cycling and the dynamics of sediment ecosystems. The presence of a single replicon may facilitate efficient replication and resource use, possibly allowing Labilibacter sediminis to thrive in specific niches within sedimentary environments. Biologically, the traits of Labilibacter sediminis suggest that it could be well-adapted to its habitat. The streamlined genomic organization associated with having one replicon may confer advantages under certain environmental pressures, which could include fluctuations in nutrient availability or competition with other microbial species. Thus, the traits of Labilibacter sediminis not only reflect its genetic composition but also hint at its potential ecological interactions within sediment habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinilabiliaceae
GenusLabilibacter
SpeciesLabilibacter sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibacter sediminis strain CG51 CG51_Scaffold382, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

75 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeE9993_13085Not AvailableNegative3531508 - 353280047817.4
nudix domain-containing proteinE9993_13090Not AvailableNegative3532960 - 353348119757.5
nucleotidyltransferaseE9993_13095Not AvailableNegative3533567 - 353446633623.6
n-acetylmuramoyl-l-alanine amidaseE9993_13100Not AvailableNegative3534563 - 353553436865.3
metal-dependent transcriptional regulatorE9993_13105Not AvailablePositive3535727 - 353639225476.7
zinc transporter zuptE9993_13110Not AvailablePositive3536396 - 353722029628.8
tonb-dependent receptorE9993_13115Not AvailablePositive3537251 - 353954885675.8
endonuclease iiiE9993_13120Not AvailablePositive3539663 - 354034025857.4
hypothetical proteinE9993_13125Not AvailableNegative3540976 - 354157223104.8
hypothetical proteinE9993_13130Not AvailablePositive3541774 - 354433898879.5

Displaying genes 2601 – 2610 of 4673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.