Deinococcus sp. KSM4-11

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus sp. KSM4-11 is characterized by the presence of flagella, which are structures that facilitate motility. This trait suggests that KSM4-11 has the ability to move toward favorable environments or resources, an important aspect of its survival and ecological interactions. The organism possesses a single replicon, indicating a simplified genomic structure that may influence its replication and genetic stability. This trait can be significant in understanding the organism's adaptability and resilience, particularly in extreme environments where Deinococcus species are often found. The accession number for Deinococcus sp. KSM4-11 is SSNX00000000.1, which provides a reference for further genomic studies and analyses. Access to genomic data can enhance our understanding of the metabolic pathways and potential applications of this microorganism in biotechnology or environmental remediation. Overall, the presence of flagella in Deinococcus sp. KSM4-11 suggests a mobile and adaptable organism, while its single replicon may contribute to efficient replication under various environmental pressures. These traits highlight the potential ecological role of KSM4-11 in its habitat, where motility could facilitate the exploration of nutrient-rich areas or the colonization of diverse microenvironments.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus sp. KSM4-11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus sp. KSM4-11 NODE_12_length_103372_cov_709.889534,

Gene Summary

Adenine Count

722673 bp

Thymine Count

723578 bp

Guanine Count

1553788 bp

Cytosine Count

1552088 bp

Genome Length

4552127 bp

Protein-coding Genes

4217 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinE7T09_16875Not AvailablePositive3532759 - 353308812025.9
pentapeptide repeat-containing proteinE7T09_16880Not AvailablePositive3533107 - 353395830316.7
tyrosine--trna ligaseE7T09_16885Not AvailablePositive3534120 - 353536745851.4
pyruvate kinaseE7T09_16890Not AvailableNegative3535662 - 353711052698.5
phosphopyruvate hydrataseE7T09_16895Not AvailableNegative3537224 - 353849545071.4
dna polymerase iii subunit betaE7T09_16900Not AvailableNegative3538796 - 353987838670.2
chromosomal replication initiator protein dnaaE7T09_16905Not AvailableNegative3540242 - 354162452211.5
nad-dependent epimerase/dehydratase family proteinE7T09_16910Not AvailableNegative3541731 - 354269334580.8
hypothetical proteinE7T09_16915Not AvailablePositive3542761 - 354304810423.6
dna-protecting protein dpraE7T09_16920Not AvailableNegative3543067 - 354415838085.9

Displaying genes 3321 – 3330 of 4281 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.