Deinococcus sp. KSM4-11

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus sp. KSM4-11 is characterized by the presence of flagella, which are structures that facilitate motility. This trait suggests that KSM4-11 has the ability to move toward favorable environments or resources, an important aspect of its survival and ecological interactions. The organism possesses a single replicon, indicating a simplified genomic structure that may influence its replication and genetic stability. This trait can be significant in understanding the organism's adaptability and resilience, particularly in extreme environments where Deinococcus species are often found. The accession number for Deinococcus sp. KSM4-11 is SSNX00000000.1, which provides a reference for further genomic studies and analyses. Access to genomic data can enhance our understanding of the metabolic pathways and potential applications of this microorganism in biotechnology or environmental remediation. Overall, the presence of flagella in Deinococcus sp. KSM4-11 suggests a mobile and adaptable organism, while its single replicon may contribute to efficient replication under various environmental pressures. These traits highlight the potential ecological role of KSM4-11 in its habitat, where motility could facilitate the exploration of nutrient-rich areas or the colonization of diverse microenvironments.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus sp. KSM4-11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus sp. KSM4-11 NODE_12_length_103372_cov_709.889534,

Gene Summary

Adenine Count

722673 bp

Thymine Count

723578 bp

Guanine Count

1553788 bp

Cytosine Count

1552088 bp

Genome Length

4552127 bp

Protein-coding Genes

4217 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hupe/urej family proteinE7T09_07795Not AvailableNegative1588548 - 158911118532.1
urease subunit alphaE7T09_07800Not AvailableNegative1589127 - 159084860841.5
urease subunit betaE7T09_07805Not AvailableNegative1590845 - 159153124641.4
urea abc transporter substrate-binding proteinE7T09_07810Not AvailablePositive1591779 - 159296341967.4
urea abc transporter permease subunit urtbE7T09_07815Not AvailablePositive1593058 - 159396331303.3
urea abc transporter permease subunit urtcE7T09_07820Not AvailablePositive1593963 - 159503637347.9
urea abc transporter atp-binding protein urtdE7T09_07825Not AvailablePositive1595026 - 159580227774.6
urea abc transporter atp-binding subunit urteE7T09_07830Not AvailablePositive1595789 - 159649325433.8
dihydrofolate reductaseE7T09_07835Not AvailableNegative1596537 - 159699516801.3
thymidylate synthaseE7T09_07840Not AvailableNegative1597025 - 159781929904.8

Displaying genes 1551 – 1560 of 4281 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.