Pseudothauera rhizosphaerae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Zoogloeaceae

Genus

Pseudothauera

Description

Pseudothauera rhizosphaerae is characterized by a single replicon, indicating a streamlined genetic structure. This feature may contribute to its adaptability and efficiency in specific environments. The organism is cataloged under the accession number SSOD00000000.1, which provides a reference for further genetic and genomic studies. The classification of Pseudothauera rhizosphaerae suggests that it may play a role in the rhizosphere, the zone of soil surrounding plant roots. This ecological niche is significant as it is known for its complex interactions between plants and microorganisms, which can influence nutrient cycling, plant health, and soil structure. The presence of Pseudothauera rhizosphaerae in this environment may suggest its involvement in these interactions, potentially impacting plant growth and soil microbiome dynamics. Further investigation into the specific functions and ecological roles of Pseudothauera rhizosphaerae within the rhizosphere could provide insights into its contributions to soil fertility and plant-microbe interactions. Understanding the traits and behaviors of this organism could aid in enhancing agricultural practices and promoting sustainable soil management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyZoogloeaceae
GenusPseudothauera
SpeciesPseudothauera rhizosphaerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudothauera rhizosphaerae strain CC-YHH848 contig46, whole

Gene Summary

Adenine Count

732996 bp

Thymine Count

725871 bp

Guanine Count

1562755 bp

Cytosine Count

1580643 bp

Genome Length

4602265 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron donor protein cyayE6O51_14950Not AvailableNegative3159057 - 315938311552.5
hypothetical proteinE6O51_14955Not AvailablePositive3159437 - 31595925254.29
diaminopimelate decarboxylaseE6O51_14960Not AvailablePositive3159589 - 316088145427.6
hypothetical proteinE6O51_14965Not AvailableNegative3160894 - 316123812165.5
dtdp-4-dehydrorhamnose reductaseE6O51_14970Not AvailableNegative3161266 - 316216231856.8
dtdp-glucose 4,6-dehydrataseE6O51_14975Not AvailableNegative3162159 - 316322939217.1
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseE6O51_14980Not AvailablePositive3163338 - 316477450296.8
4-hydroxy-3-polyprenylbenzoate decarboxylaseE6O51_14985Not AvailableNegative3164779 - 316626955026.6
orotidine-5'-phosphate decarboxylaseE6O51_14990Not AvailableNegative3166280 - 316709228923.4
hypothetical proteinE6O51_14995Not AvailableNegative3167188 - 31674338796.98

Displaying genes 3011 – 3020 of 4296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.