Pseudothauera rhizosphaerae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Zoogloeaceae

Genus

Pseudothauera

Description

Pseudothauera rhizosphaerae is characterized by a single replicon, indicating a streamlined genetic structure. This feature may contribute to its adaptability and efficiency in specific environments. The organism is cataloged under the accession number SSOD00000000.1, which provides a reference for further genetic and genomic studies. The classification of Pseudothauera rhizosphaerae suggests that it may play a role in the rhizosphere, the zone of soil surrounding plant roots. This ecological niche is significant as it is known for its complex interactions between plants and microorganisms, which can influence nutrient cycling, plant health, and soil structure. The presence of Pseudothauera rhizosphaerae in this environment may suggest its involvement in these interactions, potentially impacting plant growth and soil microbiome dynamics. Further investigation into the specific functions and ecological roles of Pseudothauera rhizosphaerae within the rhizosphere could provide insights into its contributions to soil fertility and plant-microbe interactions. Understanding the traits and behaviors of this organism could aid in enhancing agricultural practices and promoting sustainable soil management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyZoogloeaceae
GenusPseudothauera
SpeciesPseudothauera rhizosphaerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudothauera rhizosphaerae strain CC-YHH848 contig46, whole

Gene Summary

Adenine Count

732996 bp

Thymine Count

725871 bp

Guanine Count

1562755 bp

Cytosine Count

1580643 bp

Genome Length

4602265 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna repair protein recnE6O51_06015Not AvailablePositive1247699 - 124935758931.0
ferric iron uptake transcriptional regulatorE6O51_06020Not AvailableNegative1249396 - 124983016734.9
outer membrane protein assembly factor bameE6O51_06025Not AvailablePositive1249967 - 125039215674.6
4-hydroxy-tetrahydrodipicolinate reductaseE6O51_06030Not AvailablePositive1250439 - 125124528162.2
response regulatorE6O51_06035Not AvailablePositive1251249 - 125379292013.4
sigma-70 family rna polymerase sigma factorE6O51_06040Not AvailablePositive1253963 - 125451720580.7
duf4880 domain-containing proteinE6O51_06045Not AvailablePositive1254580 - 125554234568.2
tonb-dependent siderophore receptorE6O51_06050Not AvailablePositive1255623 - 1258430102670.0
pepsy domain-containing proteinE6O51_06055Not AvailablePositive1258790 - 126039759171.5
iron transporterE6O51_06060Not AvailablePositive1260394 - 126070510959.8

Displaying genes 1291 – 1300 of 4296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.