Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | E5554_RS04180 | Not Available | Positive | 869322 - 870530 | 42727.8 |
| cytochrome b | E5554_RS04185 | Not Available | Negative | 870564 - 871076 | 19310.4 |
| acetate--coa ligase | E5554_RS04190 | Not Available | Negative | 871195 - 873138 | 70455.1 |
| glutathione s-transferase family protein | E5554_RS04195 | Not Available | Positive | 873291 - 873962 | 25582.8 |
| sensor domain-containing diguanylate cyclase | E5554_RS04200 | Not Available | Negative | 873984 - 875141 | 42243.6 |
| lysr substrate-binding domain-containing protein | E5554_RS04205 | Not Available | Negative | 875234 - 876118 | 32832.7 |
| cdc48 family aaa atpase | E5554_RS04210 | Not Available | Positive | 876456 - 878744 | 83692.0 |
| class i sam-dependent methyltransferase | E5554_RS04215 | Not Available | Positive | 878885 - 879532 | 24107.0 |
| helix-turn-helix transcriptional regulator | E5554_RS04220 | Not Available | Positive | 879644 - 880744 | 39712.5 |
| glutamate-5-semialdehyde dehydrogenase | E5554_RS04225 | Not Available | Positive | 881107 - 882372 | 44149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

