Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | E5554_RS04135 | Not Available | Positive | 861328 - 862074 | 26636.3 |
| sufd family fe-s cluster assembly protein | E5554_RS04140 | Not Available | Positive | 862071 - 862823 | 26548.4 |
| aminotransferase class v-fold plp-dependent enzyme | E5554_RS04145 | Not Available | Positive | 862820 - 864040 | 43486.2 |
| suf system fe-s cluster assembly protein | E5554_RS04150 | Not Available | Positive | 864037 - 864498 | 16551.6 |
| hesb/isca family protein | E5554_RS04155 | Not Available | Positive | 864498 - 864860 | 12638.0 |
| sdr family nad(p)-dependent oxidoreductase | E5554_RS04160 | Not Available | Positive | 864884 - 865699 | 28964.6 |
| hypothetical protein | E5554_RS22940 | Not Available | Positive | 865777 - 865935 | 5570.83 |
| dmt family transporter | E5554_RS04165 | Not Available | Negative | 866000 - 866935 | 33131.6 |
| threonine aldolase family protein | E5554_RS04170 | Not Available | Negative | 866925 - 867950 | 35999.8 |
| branched-chain amino acid aminotransferase | E5554_RS04175 | Not Available | Positive | 868105 - 869196 | 39141.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

