Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toll/interleukin-1 receptor domain-containing protein | E5554_RS00080 | Not Available | Positive | 14562 - 16157 | 59266.2 |
| nucleotide synthetase | E5554_RS00085 | Not Available | Positive | 16159 - 16641 | 18212.2 |
| trafs-binding domain-containing protein | E5554_RS00090 | Not Available | Positive | 16666 - 18117 | 51752.1 |
| crp/fnr family transcriptional regulator | E5554_RS00095 | Not Available | Negative | 18130 - 18783 | 23610.6 |
| Trna-glu | Not Available | Not Available | Positive | 19157 - 19231 | Not Available |
| single-stranded-dna-specific exonuclease recj | E5554_RS00105 | Not Available | Negative | 19333 - 21099 | 61642.3 |
| autotransporter assembly complex protein tama | E5554_RS00110 | Not Available | Positive | 21250 - 23415 | 77160.0 |
| translocation/assembly module tamb domain-containing protein | E5554_RS00115 | Not Available | Positive | 23415 - 27635 | 147767.0 |
| hypothetical protein | E5554_RS00120 | Not Available | Positive | 27674 - 28369 | 23975.1 |
| transglutaminase-like domain-containing protein | E5554_RS00125 | Not Available | Positive | 28433 - 29239 | 29041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

