Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbf | E5554_RS03490 | Not Available | Positive | 722114 - 722935 | 30018.4 |
| p-type conjugative transfer protein trbg | E5554_RS03495 | Not Available | Positive | 722932 - 723783 | 30098.2 |
| trbi/virb10 family protein | E5554_RS03500 | Not Available | Positive | 723780 - 724964 | 40946.0 |
| duf2274 domain-containing protein | E5554_RS03505 | Not Available | Positive | 724968 - 725198 | 8550.28 |
| alpa family phage regulatory protein | E5554_RS03510 | Not Available | Positive | 725195 - 725401 | 7498.18 |
| zinc ribbon domain-containing protein | E5554_RS03515 | Not Available | Negative | 725731 - 726345 | 23038.6 |
| tonb-dependent siderophore receptor | E5554_RS22925 | Not Available | Negative | 726353 - 726463 | 4000.81 |
| is5 family transposase | E5554_RS03525 | Not Available | Negative | 727233 - 728057 | 31995.8 |
| is5 family transposase | E5554_RS03530 | Not Available | Positive | 728213 - 729025 | 31170.3 |
| hypothetical protein | E5554_RS03535 | Not Available | Negative | 729239 - 729520 | 10295.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

