Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atxe2 family lasso peptide isopeptidase | E5554_RS03335 | Not Available | Negative | 691232 - 693244 | 73141.4 |
| tonb-dependent receptor | E5554_RS03340 | Not Available | Negative | 693374 - 695926 | 90088.2 |
| fecr family protein | E5554_RS03345 | Not Available | Negative | 695986 - 697068 | 38403.8 |
| rna polymerase sigma factor | E5554_RS03350 | Not Available | Negative | 697065 - 697655 | 22059.2 |
| nucleotidyltransferase and hepn domain-containing protein | E5554_RS03355 | Not Available | Negative | 697881 - 698807 | 35715.5 |
| is110 family transposase | E5554_RS03360 | Not Available | Negative | 699395 - 700510 | 41739.6 |
| arsr/smtb family transcription factor | E5554_RS03365 | Not Available | Negative | 700963 - 701355 | 14255.3 |
| peroxiredoxin | E5554_RS03370 | Not Available | Negative | 701352 - 701975 | 23231.6 |
| mbl fold metallo-hydrolase | E5554_RS03375 | Not Available | Positive | 702063 - 702980 | 33531.7 |
| yeee/yede family protein | E5554_RS03380 | Not Available | Positive | 702977 - 703426 | 14776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

