Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylate--amine ligase | E5554_RS02960 | Not Available | Positive | 613823 - 615031 | 44742.4 |
| phosphotyrosine protein phosphatase | E5554_RS02965 | Not Available | Negative | 615000 - 615551 | 20067.3 |
| laci family dna-binding transcriptional regulator | E5554_RS02970 | Not Available | Positive | 615643 - 616677 | 36056.5 |
| glucuronate isomerase | E5554_RS02975 | Not Available | Negative | 616682 - 618091 | 52397.8 |
| uxaa family hydrolase | E5554_RS02980 | Not Available | Positive | 618138 - 619667 | 53132.7 |
| hu family dna-binding protein | E5554_RS02985 | Not Available | Negative | 619779 - 620054 | 9373.11 |
| Trna-ser | Not Available | Not Available | Positive | 620254 - 620345 | Not Available |
| duf1134 domain-containing protein | E5554_RS02995 | Not Available | Positive | 620577 - 621380 | 27577.6 |
| dna polymerase iv | E5554_RS03000 | Not Available | Negative | 621384 - 622481 | 40190.4 |
| yced family protein | E5554_RS03005 | Not Available | Negative | 622530 - 623075 | 19479.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

