Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly lipoprotein lpte | E5554_RS02715 | Not Available | Negative | 565821 - 566366 | 18802.2 |
| leucine--trna ligase | E5554_RS02720 | Not Available | Negative | 566431 - 568944 | 93135.9 |
| duf3576 domain-containing protein | E5554_RS02725 | Not Available | Negative | 569048 - 569494 | 15974.5 |
| hypothetical protein | E5554_RS02730 | Not Available | Positive | 569729 - 570457 | 26062.0 |
| putative quinol monooxygenase | E5554_RS02735 | Not Available | Negative | 570519 - 570938 | 14774.0 |
| carboxymuconolactone decarboxylase family protein | E5554_RS02740 | Not Available | Negative | 570925 - 571248 | 11869.2 |
| thiamine phosphate synthase | E5554_RS02745 | Not Available | Negative | 571345 - 571899 | 20157.6 |
| yggs family pyridoxal phosphate-dependent enzyme | E5554_RS02750 | Not Available | Positive | 571923 - 572657 | 26062.7 |
| tonb-dependent receptor | E5554_RS02755 | Not Available | Negative | 572635 - 575430 | 98552.6 |
| ligase-associated dna damage response endonuclease pdem | E5554_RS02760 | Not Available | Negative | 575621 - 576280 | 23761.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

