Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | E5554_RS02565 | Not Available | Positive | 528813 - 531320 | 92083.1 |
| dna-3-methyladenine glycosylase i | E5554_RS02570 | Not Available | Positive | 531442 - 531999 | 20693.8 |
| cog3650 family protein | E5554_RS02575 | Not Available | Positive | 531975 - 532514 | 18725.2 |
| dj-1/pfpi family protein | E5554_RS02580 | Not Available | Positive | 532567 - 533382 | 28744.5 |
| ligase-associated dna damage response dexh box helicase | E5554_RS02585 | Not Available | Negative | 533441 - 535852 | 88574.5 |
| arylsulfatase | E5554_RS02590 | Not Available | Positive | 536016 - 538373 | 86774.2 |
| cystathionine gamma-synthase family protein | E5554_RS02595 | Not Available | Positive | 538566 - 539906 | 47806.4 |
| 2-hydroxyacid dehydrogenase | E5554_RS02600 | Not Available | Positive | 539906 - 540838 | 32935.0 |
| asma-like c-terminal region-containing protein | E5554_RS02605 | Not Available | Positive | 540906 - 542759 | 66224.4 |
| had family hydrolase | E5554_RS02610 | Not Available | Negative | 542763 - 543437 | 25305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

