Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| psts family phosphate abc transporter substrate-binding protein | E5554_RS01825 | Not Available | Positive | 371152 - 372609 | 51426.7 |
| duf6118 family protein | E5554_RS01830 | Not Available | Negative | 372823 - 373392 | 21308.9 |
| ti-type conjugative transfer relaxase traa | E5554_RS01835 | Not Available | Negative | 373402 - 376281 | 105533.0 |
| conjugal transfer protein trad | E5554_RS01840 | Not Available | Positive | 376454 - 376780 | 11199.0 |
| conjugal transfer protein trad | E5554_RS01845 | Not Available | Positive | 376686 - 377018 | 12822.8 |
| duf6771 family protein | E5554_RS22915 | Not Available | Positive | 377037 - 377204 | 6164.38 |
| hepn domain-containing protein | E5554_RS01850 | Not Available | Negative | 377219 - 378148 | 36013.1 |
| hypothetical protein | E5554_RS01855 | Not Available | Negative | 378209 - 378457 | 9964.24 |
| ardc family protein | E5554_RS01860 | Not Available | Negative | 378454 - 379341 | 32337.2 |
| helix-turn-helix transcriptional regulator | E5554_RS01865 | Not Available | Positive | 379877 - 380110 | 9011.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

