Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cap domain-containing protein | E5554_RS20800 | Not Available | Negative | 4383460 - 4384080 | 22946.3 |
| hypothetical protein | E5554_RS20805 | Not Available | Negative | 4384215 - 4384940 | 24842.0 |
| cap domain-containing protein | E5554_RS20810 | Not Available | Negative | 4385060 - 4385620 | 21083.7 |
| radical sam family heme chaperone hemw | E5554_RS20815 | Not Available | Positive | 4385688 - 4386863 | 42386.5 |
| m56 family metallopeptidase | E5554_RS20820 | Not Available | Negative | 4386870 - 4388468 | 57359.8 |
| blai/meci/copy family transcriptional regulator | E5554_RS20825 | Not Available | Negative | 4388465 - 4388833 | 13547.1 |
| grx4 family monothiol glutaredoxin | E5554_RS20830 | Not Available | Negative | 4389268 - 4389600 | 12071.5 |
| bola/ibag family iron-sulfur metabolism protein | E5554_RS20835 | Not Available | Negative | 4389666 - 4389899 | 8071.72 |
| duf1476 domain-containing protein | E5554_RS20840 | Not Available | Negative | 4389913 - 4390236 | 12170.3 |
| 3-isopropylmalate dehydratase small subunit | E5554_RS20845 | Not Available | Negative | 4390294 - 4390887 | 21445.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

