Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | E5554_RS20205 | Not Available | Positive | 4255717 - 4256874 | 41456.9 |
| hypothetical protein | E5554_RS20210 | Not Available | Negative | 4256913 - 4257158 | 8152.57 |
| asparaginase domain-containing protein | E5554_RS20215 | Not Available | Negative | 4257240 - 4257743 | 17997.8 |
| pyrroline-5-carboxylate reductase family protein | E5554_RS20220 | Not Available | Negative | 4257806 - 4258621 | 27820.0 |
| ybjn domain-containing protein | E5554_RS20225 | Not Available | Negative | 4258645 - 4259151 | 18824.0 |
| accessory factor ubik family protein | E5554_RS20230 | Not Available | Negative | 4259194 - 4259505 | 11158.1 |
| tspo/mbr family protein | E5554_RS20235 | Not Available | Negative | 4259546 - 4260094 | 19959.0 |
| efflux rnd transporter permease subunit | E5554_RS20240 | Not Available | Negative | 4260113 - 4263217 | 111324.0 |
| efflux rnd transporter periplasmic adaptor subunit | E5554_RS20245 | Not Available | Negative | 4263222 - 4264286 | 37004.9 |
| tlya family rna methyltransferase | E5554_RS20250 | Not Available | Negative | 4264375 - 4265112 | 26211.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

