Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase | E5554_RS19850 | Not Available | Negative | 4180968 - 4181897 | 33265.2 |
| hypothetical protein | E5554_RS19855 | Not Available | Negative | 4181912 - 4183741 | 63797.9 |
| hypothetical protein | E5554_RS19860 | Not Available | Negative | 4183747 - 4183932 | 6705.37 |
| shikimate kinase | E5554_RS19865 | Not Available | Positive | 4184027 - 4184575 | 20130.5 |
| 3-dehydroquinate synthase | E5554_RS19870 | Not Available | Positive | 4184566 - 4185675 | 39170.1 |
| 50s ribosomal protein l31 | E5554_RS19875 | Not Available | Negative | 4186088 - 4186312 | 8269.71 |
| 3-hydroxyacyl-acp dehydratase fabz | E5554_RS19880 | Not Available | Negative | 4186427 - 4186906 | 17071.1 |
| omph family outer membrane protein | E5554_RS19885 | Not Available | Negative | 4186911 - 4187579 | 22832.2 |
| outer membrane protein assembly factor bama | E5554_RS19890 | Not Available | Negative | 4187579 - 4190215 | 97618.3 |
| rip metalloprotease rsep | E5554_RS19895 | Not Available | Negative | 4190304 - 4191437 | 40617.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

