Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nepr family anti-sigma factor | E5554_RS19395 | Not Available | Positive | 4092480 - 4092674 | 7173.57 |
| sensor histidine kinase | E5554_RS19400 | Not Available | Positive | 4092734 - 4094287 | 57024.1 |
| trna guanosine(34) transglycosylase tgt | E5554_RS19405 | Not Available | Negative | 4094295 - 4095425 | 41238.6 |
| hypothetical protein | E5554_RS19410 | Not Available | Negative | 4095485 - 4095667 | 6967.47 |
| crotonase/enoyl-coa hydratase family protein | E5554_RS19415 | Not Available | Positive | 4095903 - 4096838 | 34396.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | E5554_RS19420 | Not Available | Negative | 4096842 - 4098833 | 72960.4 |
| chaperonin groel | E5554_RS19425 | Not Available | Negative | 4099110 - 4100753 | 57667.6 |
| co-chaperone groes | E5554_RS19430 | Not Available | Negative | 4100810 - 4101097 | 10157.3 |
| is110 family transposase | E5554_RS19435 | Not Available | Negative | 4101737 - 4102819 | 39101.9 |
| universal stress protein | E5554_RS19445 | Not Available | Positive | 4103422 - 4103859 | 15546.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

