Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5554_RS23515 | Not Available | Positive | 4031291 - 4031425 | 4684.9 |
| host attachment family protein | E5554_RS19110 | Not Available | Negative | 4031482 - 4031922 | 16479.4 |
| serine--trna ligase | E5554_RS19115 | Not Available | Positive | 4032011 - 4033288 | 46084.8 |
| 5'/3'-nucleotidase sure | E5554_RS19120 | Not Available | Positive | 4033303 - 4034067 | 27282.5 |
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | E5554_RS19125 | Not Available | Positive | 4034091 - 4035230 | 39352.1 |
| potassium channel family protein | E5554_RS19130 | Not Available | Positive | 4035227 - 4036285 | 38490.5 |
| tonb-dependent receptor domain-containing protein | E5554_RS19135 | Not Available | Positive | 4036441 - 4039266 | 99854.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | E5554_RS19140 | Not Available | Positive | 4039361 - 4040743 | 50449.3 |
| duf4163 domain-containing protein | E5554_RS19145 | Not Available | Negative | 4040762 - 4041604 | 30437.1 |
| hypothetical protein | E5554_RS19150 | Not Available | Negative | 4041604 - 4041804 | 7145.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

