Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | E5554_RS01580 | Not Available | Positive | 310137 - 310898 | 26661.7 |
| fadr/gntr family transcriptional regulator | E5554_RS01585 | Not Available | Positive | 310953 - 311738 | 28201.6 |
| pqq-dependent dehydrogenase, methanol/ethanol family | E5554_RS01590 | Not Available | Positive | 311893 - 313980 | 74217.0 |
| coxg family protein | E5554_RS01595 | Not Available | Positive | 313980 - 314651 | 22706.3 |
| fad binding domain-containing protein | E5554_RS01600 | Not Available | Positive | 314648 - 315517 | 30035.5 |
| (2fe-2s)-binding protein | E5554_RS01605 | Not Available | Positive | 315514 - 316065 | 19338.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | E5554_RS01610 | Not Available | Positive | 315990 - 318707 | 95973.1 |
| family 43 glycosylhydrolase | E5554_RS01615 | Not Available | Positive | 319140 - 319985 | 31513.5 |
| glycosyltransferase family 4 protein | E5554_RS01620 | Not Available | Negative | 319957 - 321039 | 38662.0 |
| lipopolysaccharide biosynthesis protein | E5554_RS01625 | Not Available | Negative | 321045 - 322295 | 43125.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

