Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | E5554_RS17510 | Not Available | Positive | 3685743 - 3686408 | 24442.0 |
| sensor histidine kinase | E5554_RS17515 | Not Available | Positive | 3686578 - 3687882 | 47557.4 |
| yban family protein | E5554_RS17520 | Not Available | Positive | 3687981 - 3688334 | 12966.2 |
| polyketide cyclase | E5554_RS17525 | Not Available | Negative | 3688363 - 3688764 | 15105.8 |
| competence/damage-inducible protein a | E5554_RS17530 | Not Available | Negative | 3688842 - 3689597 | 26674.1 |
| gfa family protein | E5554_RS17535 | Not Available | Negative | 3689594 - 3690076 | 17127.5 |
| type i methionyl aminopeptidase | E5554_RS17540 | Not Available | Positive | 3690160 - 3690990 | 29910.1 |
| p-ii family nitrogen regulator | E5554_RS17545 | Not Available | Positive | 3691327 - 3691665 | 12155.7 |
| type i glutamate--ammonia ligase | E5554_RS17550 | Not Available | Positive | 3691760 - 3693172 | 52426.5 |
| helix-turn-helix domain-containing protein | E5554_RS17555 | Not Available | Positive | 3693293 - 3693595 | 10723.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

