Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspk | E5554_RS16965 | Not Available | Negative | 3550673 - 3551668 | 34995.3 |
| type ii secretion system minor pseudopilin gspj | E5554_RS16970 | Not Available | Negative | 3551655 - 3552350 | 25191.2 |
| type ii secretion system minor pseudopilin gspi | E5554_RS16975 | Not Available | Negative | 3552350 - 3552712 | 13010.7 |
| gsph/fimt family pseudopilin | E5554_RS16980 | Not Available | Negative | 3552777 - 3553184 | 14353.3 |
| type ii secretion system major pseudopilin gspg | E5554_RS16985 | Not Available | Negative | 3553306 - 3553812 | 18342.8 |
| type ii secretion system inner membrane protein gspf | E5554_RS16990 | Not Available | Negative | 3553824 - 3555041 | 44016.7 |
| type ii secretion system atpase gspe | E5554_RS16995 | Not Available | Negative | 3555034 - 3556548 | 54512.7 |
| type ii secretion system secretin gspd | E5554_RS17000 | Not Available | Negative | 3556572 - 3558818 | 77968.7 |
| type ii secretion system protein n | E5554_RS17005 | Not Available | Negative | 3558815 - 3559675 | 29518.3 |
| prolyl hydroxylase family protein | E5554_RS17010 | Not Available | Positive | 3559860 - 3560519 | 24365.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

