Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | E5554_RS16310 | Not Available | Positive | 3407785 - 3408543 | 28061.9 |
| acyl-homoserine-lactone synthase | E5554_RS16315 | Not Available | Positive | 3408682 - 3409296 | 22517.3 |
| phytanoyl-coa dioxygenase family protein | E5554_RS16320 | Not Available | Positive | 3409308 - 3410207 | 33402.8 |
| marr family transcriptional regulator | E5554_RS16325 | Not Available | Positive | 3410250 - 3410672 | 15973.3 |
| copg family transcriptional regulator | E5554_RS16330 | Not Available | Positive | 3410704 - 3410928 | 7908.52 |
| ta system vapc family ribonuclease toxin | E5554_RS16335 | Not Available | Positive | 3410925 - 3411362 | 15629.8 |
| nucleotidyltransferase and hepn domain-containing protein | E5554_RS16340 | Not Available | Positive | 3411362 - 3412282 | 35224.9 |
| hypothetical protein | E5554_RS16345 | Not Available | Positive | 3412601 - 3414250 | 61590.0 |
| hypothetical protein | E5554_RS16350 | Not Available | Positive | 3414280 - 3415266 | 36856.3 |
| nerd domain-containing protein | E5554_RS16355 | Not Available | Negative | 3415960 - 3416832 | 32868.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

