Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlme family rna methyltransferase | E5554_RS00480 | Not Available | Negative | 94424 - 95098 | 24347.4 |
| ppx/gppa phosphatase family protein | E5554_RS00485 | Not Available | Negative | 95095 - 96213 | 39574.5 |
| autotransporter domain-containing protein | E5554_RS00490 | Not Available | Positive | 96550 - 99882 | 115392.0 |
| endo-1,4-beta-xylanase | E5554_RS00495 | Not Available | Positive | 100006 - 101139 | 42016.3 |
| na+/h+ antiporter | E5554_RS00500 | Not Available | Positive | 101210 - 102793 | 56441.4 |
| nucleotidyltransferase family protein | E5554_RS00505 | Not Available | Positive | 102799 - 103344 | 20644.7 |
| mth938/ndufaf3 family protein | E5554_RS00510 | Not Available | Negative | 103345 - 103656 | 11122.6 |
| protein translocase subunit secf | E5554_RS00515 | Not Available | Negative | 103743 - 104726 | 35429.9 |
| protein translocase subunit secd | E5554_RS00520 | Not Available | Negative | 104748 - 106349 | 56681.2 |
| preprotein translocase subunit yajc | E5554_RS00525 | Not Available | Negative | 106357 - 106692 | 11825.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

