Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | E5554_RS04785 | Not Available | Positive | 1005315 - 1006553 | 45179.5 |
| hypothetical protein | E5554_RS04790 | Not Available | Positive | 1007084 - 1007530 | 16150.3 |
| cation transporter | E5554_RS04795 | Not Available | Positive | 1007527 - 1008462 | 34243.5 |
| cation diffusion facilitator family transporter | E5554_RS04800 | Not Available | Negative | 1008459 - 1009406 | 33855.0 |
| flavodoxin family protein | E5554_RS04805 | Not Available | Negative | 1009412 - 1010020 | 21416.6 |
| ku protein | E5554_RS04810 | Not Available | Positive | 1010336 - 1011214 | 32378.1 |
| mgtc/sapb family protein | E5554_RS04815 | Not Available | Positive | 1011214 - 1011690 | 16757.9 |
| dna ligase d | E5554_RS04820 | Not Available | Positive | 1011687 - 1014200 | 92240.4 |
| c-type cytochrome | E5554_RS04830 | Not Available | Negative | 1014401 - 1015441 | 37454.1 |
| cytochrome c oxidase assembly protein | E5554_RS04835 | Not Available | Negative | 1015438 - 1016034 | 20696.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

