Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. PAMC28499 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866208 bp
Thymine Count
867213 bp
Guanine Count
1573218 bp
Cytosine Count
1573976 bp
Genome Length
4880615 bp
Protein-coding Genes
4499 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | E5554_RS00180 | Not Available | Negative | 43134 - 43955 | 28476.0 |
| subclass b3 metallo-beta-lactamase | E5554_RS00185 | Not Available | Negative | 44016 - 44942 | 32905.8 |
| lysr family transcriptional regulator | E5554_RS00190 | Not Available | Positive | 45050 - 45922 | 31012.8 |
| transcription elongation factor greb | E5554_RS00195 | Not Available | Negative | 46022 - 46507 | 17997.3 |
| lytic transglycosylase domain-containing protein | E5554_RS00200 | Not Available | Negative | 46553 - 48625 | 74901.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | E5554_RS00205 | Not Available | Positive | 48725 - 49603 | 31042.8 |
| ssra-binding protein smpb | E5554_RS00210 | Not Available | Positive | 49648 - 50130 | 18500.2 |
| duf2062 domain-containing protein | E5554_RS00215 | Not Available | Positive | 50134 - 50727 | 21818.9 |
| tonb-dependent siderophore receptor | E5554_RS00220 | Not Available | Positive | 50811 - 53197 | 82636.0 |
| response regulator | E5554_RS00225 | Not Available | Positive | 53282 - 53638 | 12585.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

