Antarcticimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Antarcticimicrobium

Description

Antarcticimicrobium sediminis is a notable microbial species characterized by having a single replicon. This trait suggests a streamlined genomic organization, which may be advantageous for adaptation to its environmental niche. The species is cataloged under the accession number SMFP00000000.1, indicating its inclusion in genomic databases for further research and analysis. The presence of Antarcticimicrobium sediminis in Antarctic ecosystems highlights its potential role in biogeochemical processes. Microbial life in polar regions often plays critical roles in nutrient cycling and organic matter decomposition, contributing to the overall health of these ecosystems. The single replicon trait could imply a level of efficiency in resource utilization, which is essential for survival in the extreme conditions typical of Antarctic environments. Understanding the genomic characteristics of Antarcticimicrobium sediminis may provide insights into its ecological functions and adaptive strategies. This knowledge is valuable for broader studies on microbial diversity in extreme habitats and their contributions to ecosystem dynamics. The unique adaptations of Antarcticimicrobium sediminis may also inform research on microbial resilience and the potential impacts of climate change on polar microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAntarcticimicrobium
SpeciesAntarcticimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Antarcticimicrobium sediminis strain S4J41 T4a4_scaffold76, whole

Gene Summary

Adenine Count

856336 bp

Thymine Count

861986 bp

Guanine Count

1450874 bp

Cytosine Count

1441384 bp

Genome Length

4610588 bp

Protein-coding Genes

4144 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxylesteraseE1B25_17675Not AvailablePositive3748623 - 374919820958.5
heme lyase ccmf/nrfe family subunitE1B25_17680Not AvailablePositive3749315 - 375128271551.2
cytochrome c-type biogenesis protein ccmhE1B25_17685Not AvailablePositive3751279 - 375175517806.8
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseE1B25_17690Not AvailablePositive3751847 - 375262027466.9
hypothetical proteinE1B25_17695Not AvailablePositive3752713 - 375427255025.3
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaE1B25_17700Not AvailableNegative3754269 - 375510830248.0
4-hydroxythreonine-4-phosphate dehydrogenase pdxaE1B25_17705Not AvailableNegative3755218 - 375618333972.2
peptidylprolyl isomeraseE1B25_17710Not AvailableNegative3756180 - 375741244271.1
lps-assembly protein lptdE1B25_17715Not AvailableNegative3757430 - 375947275544.4
lps export abc transporter permease lptgE1B25_17720Not AvailableNegative3759673 - 376077039015.2

Displaying genes 3501 – 3510 of 4271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.