Antarcticimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Antarcticimicrobium

Description

Antarcticimicrobium sediminis is a notable microbial species characterized by having a single replicon. This trait suggests a streamlined genomic organization, which may be advantageous for adaptation to its environmental niche. The species is cataloged under the accession number SMFP00000000.1, indicating its inclusion in genomic databases for further research and analysis. The presence of Antarcticimicrobium sediminis in Antarctic ecosystems highlights its potential role in biogeochemical processes. Microbial life in polar regions often plays critical roles in nutrient cycling and organic matter decomposition, contributing to the overall health of these ecosystems. The single replicon trait could imply a level of efficiency in resource utilization, which is essential for survival in the extreme conditions typical of Antarctic environments. Understanding the genomic characteristics of Antarcticimicrobium sediminis may provide insights into its ecological functions and adaptive strategies. This knowledge is valuable for broader studies on microbial diversity in extreme habitats and their contributions to ecosystem dynamics. The unique adaptations of Antarcticimicrobium sediminis may also inform research on microbial resilience and the potential impacts of climate change on polar microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAntarcticimicrobium
SpeciesAntarcticimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Antarcticimicrobium sediminis strain S4J41 T4a4_scaffold76, whole

Gene Summary

Adenine Count

856336 bp

Thymine Count

861986 bp

Guanine Count

1450874 bp

Cytosine Count

1441384 bp

Genome Length

4610588 bp

Protein-coding Genes

4144 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6-hydroxynicotinate reductaseE1B25_08095Not AvailablePositive1691557 - 169302352521.7
upf0280 family proteinE1B25_08100Not AvailablePositive1693026 - 169386828782.4
amino acid synthesis family proteinE1B25_08105Not AvailablePositive1693861 - 169444220664.2
hydroxymethylbilane synthaseE1B25_08110Not AvailableNegative1694574 - 169553334025.8
ammonium transporterE1B25_08115Not AvailableNegative1695794 - 169714046970.9
p-ii family nitrogen regulatorE1B25_08120Not AvailableNegative1697175 - 169751312172.8
pbp1a family penicillin-binding proteinE1B25_08125Not AvailablePositive1697768 - 169997578501.9
abc transporter substrate-binding proteinE1B25_08130Not AvailableNegative1700135 - 170074022444.8
vacj family lipoproteinE1B25_08135Not AvailableNegative1700741 - 170149327578.4
type i secretion system permease/atpaseE1B25_08140Not AvailablePositive1701691 - 170343962768.7

Displaying genes 1621 – 1630 of 4271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.