Antarcticimicrobium sediminis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Antarcticimicrobium

Description

Antarcticimicrobium sediminis is a notable microbial species characterized by having a single replicon. This trait suggests a streamlined genomic organization, which may be advantageous for adaptation to its environmental niche. The species is cataloged under the accession number SMFP00000000.1, indicating its inclusion in genomic databases for further research and analysis. The presence of Antarcticimicrobium sediminis in Antarctic ecosystems highlights its potential role in biogeochemical processes. Microbial life in polar regions often plays critical roles in nutrient cycling and organic matter decomposition, contributing to the overall health of these ecosystems. The single replicon trait could imply a level of efficiency in resource utilization, which is essential for survival in the extreme conditions typical of Antarctic environments. Understanding the genomic characteristics of Antarcticimicrobium sediminis may provide insights into its ecological functions and adaptive strategies. This knowledge is valuable for broader studies on microbial diversity in extreme habitats and their contributions to ecosystem dynamics. The unique adaptations of Antarcticimicrobium sediminis may also inform research on microbial resilience and the potential impacts of climate change on polar microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAntarcticimicrobium
SpeciesAntarcticimicrobium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Antarcticimicrobium sediminis strain S4J41 T4a4_scaffold76, whole

Gene Summary

Adenine Count

856336 bp

Thymine Count

861986 bp

Guanine Count

1450874 bp

Cytosine Count

1441384 bp

Genome Length

4610588 bp

Protein-coding Genes

4144 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase expression/formation protein hupkE1B25_04850Not AvailablePositive1020468 - 102132530729.8
hydrogenase maturation nickel metallochaperone hypaE1B25_04855Not AvailablePositive1021318 - 102165912169.0
hydrogenase accessory protein hypbE1B25_04860Not AvailablePositive1021659 - 102249229644.2
sigma-54-dependent fis family transcriptional regulatorE1B25_04865Not AvailablePositive1022496 - 102397755470.9
hypc/hybg/hupf family hydrogenase formation chaperoneE1B25_04870Not AvailablePositive1023980 - 102427010088.3
hydrogenase formation protein hypdE1B25_04875Not AvailablePositive1024267 - 102540941088.3
hydrogenase expression/formation protein hypeE1B25_04880Not AvailablePositive1025441 - 102646635342.6
altronate dehydrataseE1B25_04885Not AvailableNegative1026759 - 102828554391.6
c4-dicarboxylate abc transporter permeaseE1B25_04890Not AvailableNegative1028401 - 102990952402.8
tripartite tricarboxylate transporter tctb family proteinE1B25_04895Not AvailableNegative1029912 - 103042717758.2

Displaying genes 1001 – 1010 of 4271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.