Carideicomes alvinocaridis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Carideicomes

Description

Carideicomes alvinocaridis is a species classified under the domain of bacteria, characterized by having a single replicon. Its genomic information is accessible through the accession number SRJI00000000.2. This trait of possessing one replicon suggests a streamlined genomic organization, which may influence various biological processes, including replication and gene expression. The single replicon characteristic could imply a certain efficiency in genomic replication that might be advantageous in specific environments or ecological niches. The organism's biological and ecological roles are not detailed in the provided data, but understanding its genomic structure can provide insights into its adaptability and survival strategies in various habitats. In summary, Carideicomes alvinocaridis is defined by its single replicon and is cataloged under the accession SRJI00000000.2. While specific ecological interactions or biological functions are not provided, the trait of having one replicon may be indicative of its evolutionary adaptations. Further research could elucidate its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusCarideicomes
SpeciesCarideicomes alvinocaridis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Carideicomes alvinocaridis strain SCR17 scaffold_1481, whole

Gene Summary

Adenine Count

843852 bp

Thymine Count

843836 bp

Guanine Count

1764774 bp

Cytosine Count

1770442 bp

Genome Length

5228280 bp

Protein-coding Genes

5304 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sige family rna polymerase sigma factorE0K89_026280Not AvailablePositive5129197 - 51293344771.68
sigma-54-dependent fis family transcriptional regulatorE0K89_026285Not AvailablePositive5129972 - 51301325894.09
propionyl-coa--succinate coa transferaseE0K89_026290Not AvailablePositive5130359 - 513074514342.8
malate synthase aE0K89_026295Not AvailableNegative5130746 - 513113214078.6
llm class flavin-dependent oxidoreductaseE0K89_026300Not AvailablePositive5131133 - 513151913843.4
atp-dependent dna helicase recgE0K89_026305Not AvailableNegative5131520 - 513190613844.6
smp-30/gluconolactonase/lre family proteinE0K89_026310Not AvailablePositive5131907 - 513228013197.5
zinc carboxypeptidaseE0K89_026315Not AvailablePositive5132294 - 513268014171.8
bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunitE0K89_026320Not AvailablePositive5133067 - 513337810842.6
bifunctional 3'-5' exonuclease/dna polymeraseE0K89_026325Not AvailablePositive5133453 - 513383813852.3

Displaying genes 5141 – 5150 of 5377 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.