Carideicomes alvinocaridis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Carideicomes

Description

Carideicomes alvinocaridis is a species classified under the domain of bacteria, characterized by having a single replicon. Its genomic information is accessible through the accession number SRJI00000000.2. This trait of possessing one replicon suggests a streamlined genomic organization, which may influence various biological processes, including replication and gene expression. The single replicon characteristic could imply a certain efficiency in genomic replication that might be advantageous in specific environments or ecological niches. The organism's biological and ecological roles are not detailed in the provided data, but understanding its genomic structure can provide insights into its adaptability and survival strategies in various habitats. In summary, Carideicomes alvinocaridis is defined by its single replicon and is cataloged under the accession SRJI00000000.2. While specific ecological interactions or biological functions are not provided, the trait of having one replicon may be indicative of its evolutionary adaptations. Further research could elucidate its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusCarideicomes
SpeciesCarideicomes alvinocaridis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Carideicomes alvinocaridis strain SCR17 scaffold_1481, whole

Gene Summary

Adenine Count

843852 bp

Thymine Count

843836 bp

Guanine Count

1764774 bp

Cytosine Count

1770442 bp

Genome Length

5228280 bp

Protein-coding Genes

5304 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseE0K89_024660Not AvailablePositive4987064 - 49872897582.93
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseE0K89_024665Not AvailablePositive4987286 - 49875227909.25
integration host factorE0K89_024670Not AvailablePositive4988194 - 49884388935.7
hypothetical proteinE0K89_024675Not AvailableNegative4988439 - 498889617918.2
aspartate 1-decarboxylaseE0K89_024680Not AvailablePositive4988897 - 498926012721.9
polyketide cyclaseE0K89_024685Not AvailableNegative4989284 - 49893532263.7
Trna-metNot AvailableNot AvailablePositive4989363 - 4989436Not Available
Trna-thrNot AvailableNot AvailablePositive4989497 - 4989568Not Available
oligosaccharide flippase family proteinE0K89_024700Not AvailableNegative4989811 - 499026516597.1
mbl fold metallo-hydrolaseE0K89_024705Not AvailablePositive4990268 - 499072415911.6

Displaying genes 4831 – 4840 of 5377 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.